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Structural elements
Secondary structures
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Supported by:
Institute of Computing Science
,
Poznan University of Technology
Institute of Bioorganic Chemistry
,
Polish Academy of Sciences
Selected RNA databases
The RCSB Protein Data Bank (PDB)
The Nucleic Acid Database (NDB)
A database of RNA base-pair structures (BPS)
A database of RNA junction and kissing loop structures (RNAJunction)
The RNA Modification Database (RNAmods)
Database of RNA Modifications (Modomics)
RNA structure analysis & visualization
RNAComposer - automated RNA 3D structure modeling server
RNAssess - a webserver for quality assessment of RNA 3D structures
RNAlyzer - RNA 3D structure comparison framework
RNApdbee - RNA secondary structure extraction from PDB files
Mfold (prediction of RNA secondary structure)
Bielefeld University Bioinformatics Server (BiBiServ)
RNAView Secondary Structure Viewer
PseudoViewer
Vienna RNA Package
Alignment of RNA Tertiary Structures (ARTS)
3DNA - Analysis, rebuilding, and visualization of 3D RNA & DNA structures
Jmol (an open-source Java viewer for chemical structures in 3D)
PyMOL (molecular visualization system)
Jena Library of biological macromolecules
The RNA World Website
FASTR3D
