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Institute of Computing Science
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Poznan University of Technology
Institute of Bioorganic Chemistry
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Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
2B9M
RR0130
A, V, W, X
1
RIBOSOME
X-Ray Difraction
6.76
2005-10-12
model 1
>strand_A
UUUGUuGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGAUCACCUCCUUUCU
-----....[[..[.(.(((.]..]].((.(.((.....((((..(((....(((.(((..(((..((.((((((((((.....)))))))))).)))))......(((......((((((((..((....((((((.(((((....(((.(......).))).....)))))....(.((.(((((....))))).)).)...((((...)))).))))))...))))))))))(((....(((..(((((.(.........).))))))))......)))..(((.((((....))))....)))))).(((((............))))).(.((....)).)...)))))).).....(.(((...((..........).))))).))...))))...(((......((((....)))).....))).....(((((...(....((((.....)))).....)....)))))......((((([......((.(.....((...])).......).)).))))).....))).))..........(((.[...(.((((...(((.(((((((.(((((.(((........(((((.....)))))......))).)))..)))))))))..(((((((((...((((((((.....(((((....((........)).......))))).....).......(......).)))))))..))))).)))..))))...))))....(.((((...((...((((.........))))...)))))).)......{...((((((..(.((((((((...)))))))).)...((..].)).....)))))))))).((.......((((....)))).....))...))).)(.(((.((((.((.(....(((.....((((((((......((........))..........(((((((......(((((((...(.(((((....))))).).(..(((....)))..).)))))))..((.(.....(.((((.(....(((((.(((....)))...((........))....)))))......((..((((((........(((.....))).......)))))).....(((((....))))).........))......).).)))....)...)))....)))))))...)).))))))...(...(((((((.....(((..((..((((....))))..))....))).....)))))))......(....(((((((........)))))))....)..)...)))......((((((............)))))).......)...)).)))))))..)..(.(..((.(.((((.(((..((((.((((((((.....((((....(((....))).))))....)))))))).))))..))).))))..).))...)..)..(((((((((....)))))))))}.............--
>strand_V
gCGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAGAUCUGGAGGUCCUGUGUUCGAUCCACAGAAUUCGCACCA
.(....(....((........)).........................((.............)))....).....
>strand_W
gCGGAUUUAGCUCAGUUGGGAGAGCGCCAGACUGAAgAuCUGGAGGUCCUGUGUuCGAUCCACAGAAUUCGCACCA
.((((....((((.....[..)))).((((.........)))).......(((..]....)))....)))).....
>strand_X
AUUCUGA
-......
