You are 4031417 visitor.
Currently 8 users online.


Sequence & secondary structure in dot-bracket notation
       
 PDB id   NDB id  Strands     Number of models     Functional class     Experimental method     Resolution [Å]     PDB deposition
2B9P RR0133 B, A1RIBOSOMEX-Ray Difraction6.462005-10-12


model 1
>strand_B
aAUCCCCCGUGCCCAUAGCGGCGUGGAACCACCCGUUCCCAUUCCGAACACGGAAGUGAAACGCGCCAGCGCCGAUGGUACUGGGCGGGCGACCGCCUGGGAGAGUAGGUCGGUGCGGGGGAU
...(((((((((......((.((((....(((((.(.............).))..)))...)))).).).(((.......((((((((....)))))))).......)))..)))))))))..
>strand_A
gGUCAAGAUGGUAAGGGCCCACGGUGGAUGCCUCGGCACCCGAGCCGAUGAAGGACGUGGCUACCUGCGAUAAGCCAGGGGGAGCCGGUAGCGGGCGUGGAUCCCUGGAUGUCCGAAUGGGGGAACCCGGCCGGCGGGAACGCCGGUCACCGCGCUUUUGCGCGGGGGGAACCUGGGGAACUGAAACAUCUCAGUACCCAGAGGAGAGGAAAGAGAAAUCGACUCCCUGAGUAGCGGCGAGCGAAAGGGGACCAGCCUAAACCGUCCGGCUUGUCCGGGCGGGGUCGUGGGGCCCUCGGACACCGAAUCCCCAGCCUAGCCGAAGCUGUUGGGAAGCAGCGCCAGAGAGGGUGAAAGCCCCGUAGGCGAAAGGUGGGGGGAUAGGUGAGGGUACCCGAGUACCCCGUGGUUCGUGGAGCCAUGGGGGAAUCUGGGCGGACCACCGGCCUAAGGCUAAGUACUCCGGGUGACCGAUAGCGCACCAGUACCGUGAGGGAAAGGUGAAAAGAACCCCGGGAGGGGAGUGAAAUAGAGCCUGAAACCGUGGGCUUACAAGCAGUCACGGCCCCGCAAGGGGUUGUGGCGUGCCUAUUGAAGCAUGAGCCGGCGACUCACGGUCGUGGGCGAGCUUAAGCCGUUGAGGCGGAGGCGUAGGGAAACCGAGUCCGAACAGGGCGCAAGCGGGCCGCACGCGGCCCGCAAAGUCCGCGGCCGUGGACCCGAAACCGGGCGAGCUAGCCCUGGCCAGGGUGAAGCUGGGGUGAGACCCAGUGGAGGCCCGAACCGGUGGGGGAUGCAAACCCCUCGGAUGAGCUGGGGCUAGGAGUGAAAAGCUAACCGAGCCCGGAGAUAGCUGGUUCUCCCCGAAAUGACUUUAGGGUCAGCCUCAGGCGCUGACUGGGGCCUGUAGAGCACUGAUAGGGCUAGGGGGCCCACCAGCCUACCAAACCCUGUCAAACUCCGAAGGGUCCCAGGUGGAGCCUGGGAGUGAGGGCGCGAGCGAUAACGUCCGCGUCCGAGCGCGGGAACAACCGAGACCGCCAGCUAAGGCCCCCAAGUCUGGGCUAAGUGGUAAAGGAUGUGGCGCCGCGAAGACAGCCAGGAGGUUGGCUUAGAAGCAGCCAUCCUUUAAAGAGUGCGUAAUAGCUCACUGGUCGAGUGGCGCCGCGCCGAAAAUGAUGCGGGGCUUAAGCCCAGCGCCGAAGCUGCGGGUCUGGGGGAUGACCCCAGGCGGUAGGGGAGCGUUCCCGAUGCCGAUGAAGGCCGACCCGCGAGGCGGCUGGAGGUAAGGGAAGUGCGAAUGCCGGCAUGAGUAACGAUAAAGAGGGUGAGAAUCCCUCUCGCCGUAAGCCCAAGGGUUCCUACGCAAUGGUCGUCAGCGUAGGGUUAGGCGGGACCUAAGGUGAAGCCGAAAGGCGUAGCCGAAGGGCAGCCGGUUAAUAUUCCGGCCCUUCCCGCAGGUGCGAUGGGGGGACGCUCUAGGCUAGGGGGACCGGAGCCAUGGACGAGCCCGGCCAGAAGCGCAGGGUGGGAGGUAGGCAAAUCCGCCUCCCAACAAGCUCUGCGUGGUGGGGAAGCCCGUACGGGUGACAACCCCCCGAAGCCAGGGAGCCAAGAAAAGCCUCUAAGCACAACCUGCGGGAACCCGUACCGCAAACCGACACAGGUGGGCGGGUGCAAGAGCACUCAGGCGCGCGGGAGAACCCUCGCCAAGGAACUCUGCAAGUUGGCCCCGUAACUUCGGGAGAAGGGGUGCUCCCUGGGGUGAUGAGCCCCGGGGAGCCGCAGUGAACAGGCUCUGGCGACUGUUUACCAAAAACACAGCUCUCUGCGAACUCGUAAGAGGAGGUAUAGGGAGCGACGCUUGCCCGGUGCCGGAAGGUCAAGGGGAGGGGUGCAAGCCCCGAACCGAAGCCCCGGUGAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAAAGCGUAACGACCGGAGCGCUGUCUCGGCGAGGGACCCGGUGAAAUUGAACUGGCCGUGAAGAUGCGGCCUACCCGUGGCAGGACGAAAAGACCCCGUGGAGCUUUACUGCAGCCUGGUGUUGGCUCUUGGUCGCGCCUGCGUAGGAUAGGUGGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACCACCCUGGCGCGGCUGGGGGCCUAACCCUCGGAUGGGGGGACAGCGCUUGGCGGGCAGUUUGACUGGGGCGGUCGCCUCCUAAAAGGUAACGGAGGCGCCCAAAGGUCCCCUCAGGCGGGACGGAAAUCCGCCGGAGAGCGCAAGGGUAGAAGGGGGCCUGACUGCGAGGCCUGCAAGCCGAGCAGGGGCGAAAGCCGGGCCUAGUGAACCGGUGGUCCCGUGUGGAAGGGCCAUCGAUCAACGGAUAAAAGUUACCCCGGGGAUAACAGGCUGAUCUCCCCCGAGCGUCCACAGCGGCGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGCAUCCUGGGGCUGAAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCUCUAUCCGCCACGGGCGCAGGAGGCUUGAGGGGGGCUCUUCCUAGUACGAGAGGACCGGAAGGGACGCACCUCUGGUUUCCCAGCUGUCCCUCCAGGGGCAUAAGCUGGGUAGCCAUGUGCGGAAGGGAUAACCGCUGAAAGCAUCUAAGCGGGAAGCCCGCCCCAAGAUGAGGCCUCCCACGGCGUCAAGCCGGUAAGGACCCGGGAAGACCACCCGGUGGAUGGGCCGGGGGUGUAAGCGCCGCGAGGCGUUGAGCCGACCGGUCCCAAUCGUCCGAGGUCUUGACCCCUC
.(((.(.(......(..(((((((.....(((..((((((((((((......((.((.......[..)).....((((((...(((]......)))......))))))....))....(((....)))((((............))))..................))...((((((.....(......)......))))).).........(......)...(((((.....((.....))....)))))...(((.....(((..(.......)..))).........((...(...........(.(.....(....(...((((........))))(((...)..[[.....))]].....).....)......)).......)...).).......(((.(((((.......))))).)))......(((((...[[[)-))))..)))......)).)))))).))...............((....))....))......(...(((....))).............)).....)))))))..).......(((((..(((......)))..)))))..................((((((....(((((((((((((............................((....))..............----------------------......)))))))))))))...(.....((((((.....(((((((((..((((...((((((......))))))...).)))...((...((((........))))..))....)))))))))...(((.....)))......))))))........)...((((((....((.((....)).).)((((((((.....(((((((((...(((...((((((((...((.(((......)))..))...))))))))..)).)...))))))))).....))))))).)....((((((.((......)).))))))......(.(......).)...((...((....((..[....(.((((((...........((..((((((..(........((..(.(((..(.............)..)))......................)..))....)..)))))).))...........]........))))))).))....))..))((((((.(.....).))))))....))))))(..(((....(.(......(((((.(......).)))))...).)...)))...).....)))))).......((.....((((((.......))))))((((.....(((..((...((((((...((.....)).))))))....[[((((.((...(((...(.(....).)...)))...))...(((((........)))))]](((((((((...(......(....(..((.((...(((((.((((.(...........)))))......((.......(((((((..........)))))))..........)).......(....................))))))....))..))..).........)......)......)))))))))))))..)).....((......)).)))..((((......))))..))))..((((....(.(((((..((................((((....(....).....)))).(.(((((...............))))).)(...).......(((((((((...((.........))...((.((.(.....(.(....).).......).)).))..((((.(((..(((((((..(((...((...((.((....)).))...))...))))))))..)))))(((((.........)))))........((..........((((.........))))..)..)....))))...)).))))))).....))..))))).).))))))........[..(((((......].)))))..((.(...(.............(((..((.(.(..(.((..((..(..(...(((((((...((---------------------------------------------------------------------------...))...)))))))....((.((....)).)).....)..)..))...)).)...............(.((.(...........).)).)([((....(((.(....(((..(.......)..))).....((]..[..)).....).)))....((((...((......))...)))).(((....))).))..].........((((...(..]]]...)..)))).......).......).)...)).)))......(.(.....(.((.(....(.......)....).)).)......)...)........((..((..(..(..(((.((......)).)))....)..((.........))......)..))......)).........(.(((......)).).)............)...).)).....(.((((...(.(...(((.((.................)).))).(..((....((.....(((..((..........)).....))).....))..))..)...(((....(((...............)))....)))..).).......)))).)....(........)......(((.(((((.......))))).....(..(.((.(......(.((......)).).....)..)).)...).....)))....).).))).----