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Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
2OM7
A, B, C, D, F, G, H, I, J, M
1
RIBOSOME
Electron Microscopy
7.3
2007-01-21
model 1
>strand_A
cUCCUACGGGAG
((((....))))
>strand_B
UUCCGCAAUGGGCGCAAGCCUGACGGAG
(.(((------------------)))).
>strand_C
GCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAAC
(..((.(.((((.(((..(((((((((((((...(.(((.....(.(....).)..))).)..)))))))))))))..))).))))..).))...)
>strand_D
GACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUU
((...(.--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.)..))
>strand_F
CUCUUCCUAGUACGAGAGGACCGGAAGGG
..(((((.....(....)....)))))..
>strand_G
GUGCCGGAAGGUCAAGGGGAGGGGUGCAAGCCCCGAACCGAAGCCCCGGUGAAC
(((((((..(((...((...(((((....)))))...))...))))))))..))
>strand_H
GCUGAUCUCCCCCGAGCGUCCACAGCGGCGGGGAGGUUUGGC
(((.((((((((...((.......))...)))))))..))))
>strand_I
GCCAGGAGGUUGGCUUAGAAGCAGCCAUCCUUUAAAGAGUGCGUAAUAGCUCACUGGU
((.((.(.(..(.............)..).)......................)).))
>strand_J
GCUCUUGGUCGCGCCUGCGUAGGAUAGGUGGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGGAGCGCCGGUGAAAUACCACCCUGGCGCGGCUGGGGGC
(((((((..(..(((.(.........(((((.......--------------------------.--............-)))))).)))..)..)))))))
>strand_M
UCCGUGAuAACAAAGCGGuuAUGUACCGGAUUUUUAUUCCGGCUAUcGGGGuuCAAUUCCCCGUCGCGGAGCCA
(((((((..(((.....[...))).(((((.......)))))....(((((..]....))))))))))))....