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Institute of Computing Science
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Institute of Bioorganic Chemistry
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Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
3FIC
A, V, X, W, Y, 0, Z
1
RIBOSOME
Electron Microscopy
6.4
2008-12-11
model 1
>strand_A
uGGAGAGUUUGAUCCUGGCUCAGGGUGAACGCUGGCGGCGUGCCUAAGACAUGCAAGUCGUGCGGGCCGCGGGGUUUUACUCCGUGGUCAGCGGCGGACGGGUGAGUAACGCGUGGGUGACCUACCCGGAAGAGGGGGACAACCCGGGGAAACUCGGGCUAAUCCCCCAUGUGGACCCGCCCCUUGGGGUGUGUCCAAAGGGCUUUGCCCGCUUCCGGAUGGGCCCGCGUCCCAUCAGCUAGUUGGUGGGGUAAUGGCCCACCAAGGCGACGACGGGUAGCCGGUCUGAGAGGAUGGCCGGCCACAGGGGCACUGAGACACGGGCCCCACUCCUACGGGAGGCAGCAGUUAGGAAUCUUCCGCAAUGGGCGCAAGCCUGACGGAGCGACGCCGCUUGGAGGAAGAAGCCCUUCGGGGUGUAAACUCCUGAACCCGGGACGAAACCCCCGACGAGGGGACUGACGGUACCGGGGUAAUAGCGCCGGCCAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAAGGGCGUGUAGGCGGCCUGGGGCGUCCCAUGUGAAAGACCACGGCUCAACCGUGGGGGAGCGUGGGAUACGCUCAGGCUAGACGGUGGGAGAGGGUGGUGGAAUUCCCGGAGUAGCGGUGAAAUGCGCAGAUACCGGGAGGAACGCCGAUGGCGAAGGCAGCCACCUGGUCCACCCGUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACCGGAUUAGAUACCCGGGUAGUCCACGCCCUAAACGAUGCGCGCUAGGUCUCUGGGUCUCCUGGGGGCCGAAGCUAACGCGUUAAGCGCGCCGCCUGGGGAGUACGGCCGCAAGGCUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGCCUUGACAUGCUAGGGAACCCGGGUGAAAGCCUGGGGUGCCCCGCGAGGGGAGCCCUAGCACAGGUGCUGCAUGGCCGUCGUCAGCUCGUGCCGUGAGGUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCCGCCGUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAACGGGACUGCCCGCGAAAGCGGGAGGAAGGAGGGGACGACGUCUGGUCAGCAUGGCCCUUACGGCCUGGGCGACACACGUGCUACAAUGCCCACUACAAAGCGAUGCCACCCGGCAACGGGGAGCUAAUCGCAAAAAGGUGGGCCCAGUUCGGAUUGGGGUCUGCAACCCGACCCCAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAACAAGGUAGCUGUACCGGAAGGUGCGGCUGGA
....((((..[.[[[..)))).((((.(((((..(((((((((....((..((...(((..((.((((.................)))).)))))......(((......((((((((..((...(((((((.(((......(((.(......).))).......)))....((((.((..........)).))))...((((...)))).)))))))..))))))))))(((.....((...(((((((.......))))))).)).......)))..((((((((....))))...))))))).((.((............)).)).((((....))))....)).)).).....(.(((...(.(.........).))))).)).))))))..((((......((((....)))).....))))....(((((...(......................)....)))))......((((([[[...(((((.....((.]]])).......))))))))))..)))))))))..........((([[...(.((((...(((.(((((((.((((((((((......((((.(.....).))))....))))))))..)))))))))..(((.(((((...((((((((...((((.((....((........)).......)).))))...).......((....)).)))))))..)))))..))..))))...))))....((((((...((....(.(.........).)....))))))))......{...((((((..(((((((.........)))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]].](((((.(((((((.((..(((.(..((((((((((......((........))..........((..(.(..(...((..(.(......((((....)))).........(.....)......))..)))..(.(((...((((.(.(....(((((((((....)))...(((......)))...)))))).....((((.(.((((..........................)))).).....(.(.........))........)))).....).)..))...)).)))).....).)..))...)).)))))))).(...(((((((.....(((......((((....))))........))).....)))))))......(....(((((((........)))))))....)..)..).))).....(((((((..........)))))))......))...)))))))))).))..(.(..((.(.((((.(((..(((((((((((((...(.(((.....(.(....).)..))).)..)))))))))))))..))).))))..).))...)..)..(((((((((....)))))))))}..
>strand_V
CGCGGGGUGGAGCAGCCUGGUAGCUCGUCGGGCUCAUAACCCGAAGGUCGUCGGuUCAAAUCCGGCCCCCGCAACCA
.((((((..((((.........)))).(((((..[[[..))))).....((.((.......)).)))))))).....
>strand_X
AAAAUG
...]]]
>strand_W
GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA
(((((((..((((........))))...((.........)).......(((((.......))))))))))))....
>strand_Y
GCGGAUUUAgCUCAGGAGAGCgCCAGAcUgAAgAucUGGAgUCcUGUGuuCGaUCCACAGAAUUCGCACCA
(((((((..((((..[.)))).((((...{.....))))....(((((..]....))))))))))))....
>strand_0
UUU
..}
>strand_Z
nnnnnnnnnnnnnnnnnnnnnnnnnnngu
---------------------------..