RNA FRABASE - RNA FRAgments search engine & dataBASE

Sequence & secondary structure in dot-bracket notation

PDB id	NDB id	Strands	Number of models	Functional class	Experimental method	Resolution [Å]	PDB deposition
3R1L	NA1016	B, C, E, F	1	RNA BINDING PROTEIN/RNA	X-Ray Difraction	3.12	2011-03-10

model 1

>strand_B
uCCAGUA
(((((((

>strand_C
gGAACACUAUACUACUGGAUAAUCAAAGACAAAUCUGCCCGAAGGGUUUGAGAACAUACCCAUUGCACUCCGGGUAUGCAGAGGUGGCAGCCUCCGGUGGGUUAAAACCCAACGUUCUCAACAAUAGUGa
(...[[[[[[.))))))))...............[[[[[(...).(.((((((((((((((..........)))))))..((((.]]]]]))))((.((((......)))).)))))))))).]]]]]].

>strand_E
uCCAGUA
(((((((

>strand_F
gGAACACUAUACUACUGGAUAAUCAAAGACAAAUCUGCCCGAAGGGUUUGAGAACAUACCCAUUGCACUCCGGGUAUGCAGAGGUGGCAGCCUCCGGUGGGUUAAAACCCAACGUUCUCAACAAUAGUGa
(...[[[[[[.))))))))...............[[[[[(...).(.((((((((((((((..........)))))))..((((.]]]]]))))((.((((......)))).)))))))))).]]]]]].