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Structural elements
Secondary structures
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Institute of Computing Science
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Poznan University of Technology
Institute of Bioorganic Chemistry
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Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
1P5O
1P5O
A
12
RNA
NMR
2003-04-27
models:
1
2
3
4
5
6
7
8
9
10
11
12
model
1
,
9
>strand_A
gGCUGUGAGGAACUACUGUCUUCACGCAGAAAGCGUCUAGCCAUGGCGUUAGUAUGAGUGUCGUGCAGCCUCCAGCC
.((((.((((.....(((((..(((.(.(...((.((.......)).)).....)).)))..).)))))))))))).
model
2
>strand_A
gGCUGUGAGGAACUACUGUCUUCACGCAGAAAGCGUCUAGCCAUGGCGUUAGUAUGAGUGUCGUGCAGCCUCCAGCC
..(((.((((.....(((((..(((.(.(...((((.........)))).....)).)))..).)))))))))))..
model
3
>strand_A
gGCUGUGAGGAACUACUGUCUUCACGCAGAAAGCGUCUAGCCAUGGCGUUAGUAUGAGUGUCGUGCAGCCUCCAGCC
.((((.((((.....(((((..(((.((....((((.........)))).....)).)))..).)))))))))))).
model
4
>strand_A
gGCUGUGAGGAACUACUGUCUUCACGCAGAAAGCGUCUAGCCAUGGCGUUAGUAUGAGUGUCGUGCAGCCUCCAGCC
.((((.((((.....(((((..(((.(.....((.(.........).))......).)))..).)))))))))))).
model
5
>strand_A
gGCUGUGAGGAACUACUGUCUUCACGCAGAAAGCGUCUAGCCAUGGCGUUAGUAUGAGUGUCGUGCAGCCUCCAGCC
.((((.((((.....(((((..(((...(...((.(.........).)).....)..)))..).)))))))))))).
model
6
,
7
,
10
,
12
>strand_A
gGCUGUGAGGAACUACUGUCUUCACGCAGAAAGCGUCUAGCCAUGGCGUUAGUAUGAGUGUCGUGCAGCCUCCAGCC
.((((.((((.....(((((..(((.(.(...((.(.........).)).....)).)))..).)))))))))))).
model
8
>strand_A
gGCUGUGAGGAACUACUGUCUUCACGCAGAAAGCGUCUAGCCAUGGCGUUAGUAUGAGUGUCGUGCAGCCUCCAGCC
.((((.((((.....(((((..(((.......((.(.........).))........)))..).)))))))))))).
model
11
>strand_A
gGCUGUGAGGAACUACUGUCUUCACGCAGAAAGCGUCUAGCCAUGGCGUUAGUAUGAGUGUCGUGCAGCCUCCAGCC
.((((.((((.....(((((..(((.((....((.((.......)).)).....)).)))..).)))))))))))).