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Institute of Computing Science
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Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
3IZE
A, B, C
1
RIBOSOME
Electron Microscopy
2010-10-13
model 1
>strand_A
UAUCUGGUUGAUCCUGCCAGUAGUCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUAAGUAUAAGCGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUCGUUUAUUUGAUAGUUCCUUUACUACAUGGUAUAACUGUGGUAAUUCUAGAGCUAAUACAUGCUUAAAAUCUCCCUUUGGAAUGUAUAGAUAAAAAAUCAAUGUCUUCGGAUAAUAAUCGCAUGGCCUUGUGCUGGCGAUGGUUCAUUCAAAUUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUUUCAACGGGUACGGGGAAUAAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUACCCAAUCCUAAUUCAGGGAGGUAGUGACAAUAAAACGAUACAGGGCCCAUUCGGGUCUUGUAAUUGUUGGAGGGCAAUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUAUAUUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACUUUGGGCCCGGUUGGCCGGUCCGAUUUUUUCGUGUACUGGAUUUCCAACGGGGCCUUGACUUUUACUUUGAAAAAAUUAGAGUUAGCAUGGAAUAAUAGAAUAGGACGUUUGGUUCUAUUUUGUUGGUUUCUAGGACCAUCGUAAUGAUUAAUAGGGACGGUCGGGGGCAUCAGUAUUCAAUUGUCAGAGGUGAAAUUCUUGGAUUUAUUGAAGACUAACUACUGCGAAAGCAUUUGCCAAGGACGUUUUCAUUAAUCAAGAACGAAAGUUAGGGGAUCGAAGAUGAUCAGAUACCGUCGUAGUCUUAACCAUAAACUAUGCCGACUAGGGAUCGGGUGGUGUUUUUUUAAUGACCCACUCGGCACCUUACGAGAAAUCAAAGUCGGUUCUGGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACACCAGGAGUGGAGCCUGCGGCUUAAUUUGAcUCAACACGGGGAAACUCACCAGGUCCACAAUAAGGACAGAUUGAGAGCUUUUGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUGAUUUGUCUGCUUAAUUGCGAUAACGAACGAGACCUUAACCUACUAAAUAGUGGUGCUAGCGCUGGUUAUCCACUUCUUAGAGGGACUAUCGGUUUCAAGCCGAUGGAAGUUUGAGGCAAUAACAGGUCUGUAUGCCCUUAGACGUUCUGGGCCGCACGCGCGCUACACUGACGGAGCUUGGCCGAGAGGUCUUUCCGUCGUGCUGGGGAUAGAGCAUUGUAAUUAUUGCUCUUCAACGAGGAAUUCCUAGUAAGCGCAAGUCAUCAGCUUGCGUUGAUUACGUCCUGCCCUUUGUACACACCGCCCGUCGCUAGUACCGAUUGAAUGGCUUAGUGAGGCCUCAGGAUCUGCUUAGAGAAGGGGGCAACUCCAUCUCAGAGCGGAGAAUUUGGACAAACUUGGUCAUUUAGAGGAACUAAAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGA
......[..(..((..]....((...(((((.....(....(-....(((.(((..((...((.....(())....)))).......((.......(((..((..(...........----------.((((.-.......(((.....))).........))))-((.(((......))).)).(((...[[.[..[[.(..(.....).)....))).((((.(..(.....)..)))))...........)))..))).(((....(((..--((.(((((.......))))).)))))......)))..((((.(((....)))....))))))..(..((............))..).(.((....)).)...)))))).).....(.(((...((.........).)))))......)......((((((((((((....)))))))))).)).((((([......((((..........].........)))).)))))..)))))..))............({{...(.(.((...(((..........(...(...........(..(.....)..)..........).....).-----------------------------------------------------....((((((.......]]..]]]...))))))........-------((((((..(...((((..((..((((((.(...((........))......).))))))..))........(....)....))))..)..))).)))...)))...)).)....(.(((.....(...((.(.........).))...)..))).)......[...(((..(..(....(((((((.(.(.(....)..)))))))))....)...-.(..}})....)..)))))...((........((......))......))...))..)(((.(.(.....(..(..(((((..(((.(.((((......(..........)..........(((((........((................))........(.(((..(((((((((....(.(.(((((....)))..................)).).).....(((.((((.((((..(((((.((.((..)).))..).))))..))))))).......((.......)).........-))).)....))).)))...)))))))...-....)))))..-)).)).).))).(...((.(((.....(((....)))...))).))......(....((((((..........))))))....)..)..))))).....((((((...........))))))......)...).....)).).))..(....((.(..(((..(...(.((((((((.(((..(.((..(...(((((((..(((.((((....)))).)))..)))))))...)..)).)..))).)))))))))...)..)))...).))......)..((..((.((....)).))..))]..
>strand_B
UCCGUGAUAGUUUAAUGGUCAGAAUGGGCGCUUGUCGCGUGCCAGAUCGGGGUUCAAUUCCCCGUCGCGGAGCCA
(((((((..((((........)))).(((((...[[..)))))....(((((.......))))))))))))....
>strand_C
AAAAGACUUCA
....]].....
