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Sequence & secondary structure in dot-bracket notation
       
 PDB id   NDB id  Strands     Number of models     Functional class     Experimental method     Resolution [Å]     PDB deposition
3J0U A, B, C, D1RIBOSOMEElectron Microscopy12.12011-12-07


model 1
>strand_A
aAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGAAGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGuGCCAGCAGCCgCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUgcAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGgCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCGUcACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGuAACAAGGUAACCGUAGGgGaaCCUGCGGUUGGAUCACCUCCUUA
........((((....[[[..)))).((((..((((..(((((((((....(((.(((..(((..((.((..(((.(((((......)))))..)))))..)))))......(((........(((((..((....(.((((.(.((.....((((((....))))))......)).).....(((....)))....((((....((....))..)))).)))).)...)).)))))..(((....(((..(((.((((.......)))).))))))......)))..(((.((((....))))....)))))).(((((............))))).((((....))))...)))))).).....(.(((....((((....))))..)))).)).))))))..((((......((((....)))).....))))...(.(((((...(....((.(.(.(.......))..).)).....)....)))))....)..((((([[[...(((((.....(..]]].).......))))))))))..)))).))))..........((([[...(.((((...(((.(((((((.((.((.(((.......((((((.....)))))).....))).))...)))))))))..((.((((.....((((((((....(((((((...((........))......)))))))....).......((....)).)))))))....).))).)..))))...))))....(.((((...((...((((.........))))...)))))).)..........((((((..((((((((((((.....))))))))))))...((..]])).....)))))))))).(((......((((....))))....)))...]]]..(((((.(((((((.((..(((.(..((((((((.(......((........))...........((..((..(...(((.(((..(((((((....)))))))...(......)..))).).)))..(..((...((((((.(....(((((((((....)))..((((......))))..))))))......(((..((((.(...((..(((.....)))))....).))))...(..((.((.....)).)).....)..)))......).).)))...)).)).).....))..))....)..)))))))).(...(((((((.....(((..((...(((....)))...))....))).....)))))))......(....(((((((........)))))))....)..)..).))).....(((((((.........)))))))......))...)))))))))).))..(.(.((.(.((.(.(.....((((((((((.....((((.(...((..((....)).))..).))))....))))))))))......)).))..).))...)..)..(((((..((....))..)))))..............
>strand_B
aGGGGCGuAGUUCAAuuGGuAGAGCACCGGUcUCCAaAACCGGGUgUUGGGAGuuCGAGUCUCUCCGCCCCUGCCA
((((((...((.(........).))..((((..[[[..))))........(.(.......).)...))))))....
>strand_C
aGGAUAAGUGCAUUAUGUUUAUGUGGUGAUUUGCCCUUCUGUAGCCA
....................{{{]]].....................
>strand_D
cGCGGGGuGGAGCAGCCUGGuAGCUCGUCGGGcUCAUAACCCGAAGAUCGUCGGuuCAAAUCCGGCCCCCGCAACCA
.(((.((..((((.........)))).(((((..}}}..))))).....(((((.......))))))).))).....