You are 4034982 visitor.
Currently 15 users online.


Sequence & secondary structure in dot-bracket notation
       
 PDB id   NDB id  Strands     Number of models     Functional class     Experimental method     Resolution [Å]     PDB deposition
3J0Y A, B1RIBOSOMEElectron Microscopy13.52011-12-08


model 1
>strand_A
uGCCUGGCGGCCGUAGCGCGGUGGUCCCACCUGACCCCAUGCCGAACUCAGAAGUGAAACGCCGUAGCGCCGAUGGUAGUGUGGGGUCUCCCCAUGCGAGAGUAGGGAACUGCCAGGCAU
(((((.((((.....((((((((....(((((((...(.....)...))))..)))...)))))).)).((.......(((((((.....))))))).......))...)))).))))).
>strand_B
gGUUAAGCGACUAAGCGUACACGGUGGAUGCCCUGGCAGUCAGAGGCGAUGAAGGACGUGCUAAUCUGCGAUAAGCGUCGGUAAGGUGAUAUGAACCGUUAUAACCGGCGAUUUCCGAAUGGGGAAACCCAGUGUGUUUCGACACACUAUCAUUAACUGAAUCCAUAGGUUAAUGAGGCGAACCGGGGGAACUGAAACAUCUAAGUACCCCGAGGAAAAGAAAUCAACCGAGAUUCCCCCAGUAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCUGAAUCAGUGUGUGUGUUAGUGGAAGCGUCUGGAAAGGCGCGCGAUACAGGGUGACAGCCCCGUACACAAAAAUGCACAUGCUGUGAGCUCGAUGAGUAGGGCGGGACACGUGGUAUCCUGUCUGAAUAUGGGGGGACCAUCCUCCAAGGCUAAAUACUCCUGACUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGCGAAAAGAACCCCGGCGAGGGGAGUGAAAAAGAACCUGAAACCGUGUACGUACAAGCAGUGGGAGCACGCUUAGGCGUGUGACUGCGUACCUUUUGUAUAAUGGGUCAGCGACUUAUAUUCUGUAGCAAGGUUAACCGAAUAGGGGAGCCGAAGGGAAACCGAGUCUUAACUGGGCGUUAAGUUGCAGGGUAUAGACCCGAAACCCGGUGAUCUAGCCAUGGGCAGGUUGAAGGUUGGGUAACACUAACUGGAGGACCGAACCGACUAAUguuGAAAAAUUAGCGGAUGACUUGUGGCUGGGGGUGAAAGGCCAAUCAAACCGGGAGAUAGCUGGUUCUCCCCGAAAGCUAUUUAGGUAGCGCCUCGUGAAUUCAUCUCCGGGGGUAGAGCACUGUUUCGGCAAGGGGGUCAUCCCGACUUACCAACCCGAUGCAAACUGCGAAUACCGGAGAAUGUUAUCACGGGAGACACACGGCGGGuGCUAACGUCCGUCGUGAAGAGGGAAACAACCCAGACCGCCAGCUAAGGUCCCAAAGUCAUGGUUAAGUGGGAAACGAUGUGGGAAGGCCCAGACAGCCAGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGUCGAGUCGGCCUGCGCGGAAGAUGUAACGGGGCUAAACCAUGCACCGAAGCUGCGGCAGCGACGCUUAUGCGUUGUUGGGUAGGGGAGCGUUCUGUAAGCCUGCGAAGGUGUGCUGUGAGGCAUGCUGGAGGUAUCAGAAGUGCGAAUGCUGACAUAAGUAACGAUAAAGCGGGUGAAAAGCCCGCUCGCCGGAAGACCAAGGGUUCCUGUCCAACGUUAAUCGGGGCAGGGUGAGUCGACCCCUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGGAAACAGGUUAAUAUUCCUGUACUUGGUGUUACUGCGAAGGGGGGACGGAGAAGGCUAUGUUGGCCGGGCGACGGUUGUCCCGGUUUAAGCGUGUAGGCUGGUUUUCCAGGCAAAUCCGGAAAAUCAAGGCUGAGGCGUGAUGACGAGGCACUACGGUGCUGAAGCAACAAAUGCCCUGCUUCCAGGAAAAGCCUCUAAGCAUCAGGUAACAUCAAAUCGUACCCCAAACCGACACaGGUGGUCAGGUAGAGAAUACCAAGGCGCUUGAGAGAACUCGGGUGAAGGAACUAGGCAAAAUGGUGCCGUAACUUCGGGAGAAGGCACGCUGAUAUGUAGGUGAGGUCCCUCGCGGAUGGAGCUGAAAUCAGUCGAAGAUACCAGCUGGCUGCAACUGUUUAUUAAAAACACAGCACUGUGCAAACACGAAAGUGGACGUAUACGGUGUGACGCCUgCCCGGUGCCGGAAGGUUAAUUGAUGGGGUUAGCGCAAGCGAAGCUCUUGAUCGAAGCCCCGGUAAACGGCGGCCGuAACuAuAACGGUCCUAAGGUAGCGAAAuUCCUUGUCGGGUAAGUUCCGACcUGCACGAAUGGCGUAAUGAUGGCCAGGCUGUCUCCACCCGAGACUCAGUGAAAUUGAACUCGCUGUGaAGAUGCAGUGUACCCGCGGCAAGACGGAAAGACCCCGUgAACCUUUACUAUAGCUUGACACUGAACAUUGAGCCUUGAUGUGUAGGAUAGGUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCACCCUUUAAUGUUUGAUGUUCUAACGUUGACCCGUAAUCCGGGUUGCGGACAGUGUCUGGUGGGUAGUUUGACUGgGGCGGUCUCCUCCUAAAGAGUAACGGAGGAGCACGAAGGUUGGCUAAUCCUGGUCGGACAUCAGGAGGUUAGUGCAAUGGCAUAAGCCAGCUUGACUGCGAGCGUGACGGCGCGAGCAGGUGCGAAAGCAGGUCAUAGUGAUCCGGUGGUUCUGAAUGGAAGGGCCAUCGCUCAACGGAUAAAAGGUACUCCGgGGAuAACAGGCuGAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGCAcCUCGauGUCGGCUCAUCACAUCCUGGGGCUGAAGUAGGUCCCAAGGGUAUGGCuGUUCGCCAUUUAAAGUGGUACGcGAGCuGGGUUUAGAACGUCGUGAGACAGUuCGGUCCCUAUCUGCCGUGGGCGCUGGAGAACUGAGGGGGGCUGCUCCUAGUACGAGAGGACCGGAGUGGACGCAUCACUGGUGUUCGGGUUGUCAUGCCAAUGGCACUGCCCGGUAGCUAAAUGCGGAAGAGAUAAGUGCUGAAAGCAUCUAAGCACGAAACUUGCCCCGAGAUGAGUUCUCCCUGACCCUUUAAGGGUCCUGAAGGAACGUUGAAGACGACGACGUUGAUAGGCCGGGUGUGUAAGCGCAGCGAUGCGUUGAGCUAACCGGUACUAAUGAACCGUGAGGCUUAACCUU
((((((.(......(.(((((((......(((..((((..(((((((......((.(((.[..[[[.)))......((((....(((]]]..].)))........)))).....))....(((....)))(.(((((....))))).).(.(((((((.........))))))).).)).....((((.........[.........))))............((....))...(((((.....((.]...))....)))))...((((.((((......(((((((((((((.(((.....((........))..[[(...).(((.....]])))...)))...)))))))))))))...))))...)....(((((((...[.......)))))))......(((((].[[[[)))))..)))......)).)))..)).))...............((....))....))......(..((((.....))))............))......))))))).).....(.((((..(((((......)))))..)))).[.(............)..(((((.....((...(((((((..(((...((.....))...)))...((....))..((((.....)))).....)))))))...))...((.(...((((((.....(((.((((((.(((....(((((........))))).....)))...(((.(((((........))))))))..).))))).)))...(((.....)))......))))))......).))..((((((....(((((....)))))..((((((.(..(((.(.(((.(...((....(((.((((...(.(.(((.....)).))..)...)))).)))...).)...).))).)..)))...))))))).....((.((((((........)))))).))....(((......)))...((...(((...(..[[[...(.((((((.....(.....((..(((((..(((.....{....((...(..(((.........)))..)..........(((......)))..))......)))..))))).))...........]]].)...)))))))..)...)))..)).((((((((....)))))))).....))))))((.((((....((......((((((((....))))))))...))...))))..)).....))))).(......((.....(((((.........)))))(..(....((((..((..(((((((....(.....)..))))))....[[(((...(...(((...(........)...)))...)....(((((........)))))]](((.((.((((((...((((.....((...(((..(((((((((((....{.{...))))))((..((.(...(((..(((((((.((.....)))))))))....)))..[).))...))(..((((......))))...))))))...)))....)).(..).....))))...))....)))).)).))).))).))).....((......)).))))..(((.....)))...)..)..((((....((((((((.((..(....(.......(((((....(.{..).....)))))((((((.....(((.....((....])).....)))...))))))(...).......((((((((....((.........))...(((((((.....(((....))).......))))))).}((((.(((....(((((....(.....(..((.((..((....))...)).))...)....)..)))))....)))(.(((.........))).)........((..........(((((.......)))))..)..)....))))....).))))))).)..))).)))))))).)))))).....))....(((((.....]..)))))..((((((((.((..........((((.(.(.((..(((((.(((.(((.(.(((.(((.(((.((((.(......[..(..((...........(...((........))...)................].)).).).)))).))).))).)))...(((.(((.((.....)).))))))....).))).)))..)))))..(.(......[).)((((((..........]))))))([.....(.((.((.(.((((((.......))))))...)..(][.[[[).....)).)).)....(((.....(..{.).....)))...((....))....]]].].....(((((((.((..]]]]..))))))))).....)}......)).)...))))).......(((..(.((((((...(.........)...))))))...).)).).......(..((.(((.(......((.(((......))).))......(((((.....)))))......).))..)...))...)....(.(((((....))).)).).........))))))))))[...(((((.(...(((...(((((((.....(....)....))))))).(..((...((((...((((((((((.}.}..)))))..)))))...)))).))..)...(((....((((.....}.......))))....)))..)))..]....).)))))(.((((((...))))))(....(.....((.........))......((((((((..((....(((((....)))))...))...))))).)))......)..).)).))))))..