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Institute of Computing Science
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Poznan University of Technology
Institute of Bioorganic Chemistry
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Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
3J16
J, K, L
1
RIBOSOME
Electron Microscopy
2011-12-12
model 1
>strand_J
cUCAAAGAUUAAGCCAUGuGGUAAUUCUAaUCCAAGGAAaGCAGGCGCGCAAAUUACCCAAUCCUAAUUCAGGGAGGUAGUGAgGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCuGCGGCUUAAUUUGACUCAACACGGGGAAACUCACCuGGUGGUGCAUGGCaGGUCUGUGAUGCCCUUaCACACCGCCCGUCGCUAGUaCUAAAAGUCGUAACAAGGU
.....((..[..(((.(((((.....))).((....))...))))).)...].(.(((...((((.....))).))))).)..((([[......((((.....((..]])).......)))).)))............((........)).............((.(((..(((((..))...).)))))))...........(...................).........
>strand_K
CCGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUGUGUAACAACUCACCGGCgGAGUAACUAUGACUCUCgCCUCGUCAUCUAAUUAaGUCAAGCGUUCAUAGCGACAUUgAUUGUUCACCCACUgAACUUAGUACGAGAGGAACAGUUC
((((.(((...((.........))...))).....(...((......)).).))))..(((.........)))...................(.(...((.......))...).)(.(.....).)....(((((.....(....)....)))))
>strand_L
uCCGUGAUAGUUUAAUGGUCAGAAUGGGCGCUUGUCGCGUGCCAGAUCGGGGUUCAAUUCCCCGUCGCGGAGCCA
(((((((..((((........)))).(((((.......)))))....(((((.......))))))))))))....