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Sequence & secondary structure in dot-bracket notation
       
 PDB id   NDB id  Strands     Number of models     Functional class     Experimental method     Resolution [Å]     PDB deposition
3J3E 5, 9, 7, 81RIBOSOMEElectron Microscopy62013-02-27

model 1
>strand_5
uUAUAUACAACCUCAACUCAUAUGGGACUACCCCCUGAAUUUAAGCAUAUUAAUUAGGGGAGGAAAAGAAACUAACAAGGAUUUUCUUAGUAGCGGCGAGCGAAAAGAAAACAGUUCAGCACUAAGUCACUUUGUCUAUAUGGCAAAUGUGAGAUGCAGUGUAUGGAGCGUCAAUAUUCUAGUAUGAGAAAUUAACGAUUUAAGUCCUUCUUAAAUGAGGCCAUUUACCCAUAGAGGGUGCCAGGCCCGUAUAACGUUAAUGAUUACUAGAUGAUGUUUCCAAAGAGUCGUGUUGCUUGAUAGUGCAGCACUAAGUGGGUGGUAAACUCCAUCUAAAACUAAAUAUAACCAUGAGACCGAUAGUAAACAAGUACCGUGAGGGAAAGUUGAAAAGAACUCUGAAUAGAGAGUUAAACAGUACGUGAAACUGCUUAGAGGUUAAGCCCGAUGAACCUGAAUAUCCGUUAUGGAAAAUUCAUCAUUAAAAUUGUAAUAUUUAAAUAAUAUUAUGAGAAUAGUGUGCAUUUUUUCCAUAUAAGGACAUUGUAAUCUAUUAGCAUAUACCAAAUUUAUCAUAAAAUAUAACUUAUAGUUUAUGCAUUUUAACACAGAAUAAAUGUUAUUAAUUUGAUAAAGUGCUGAUAGAUUUAUAUGAUUACAGUGCGUUAAUUUUUCGGAAUUAUAUAAUGGCAUAAUUAUCAUUGAUUUUUGUGUUUAUUAUAUGCACUUGUAUGAUUAACAAUGCGAAAGAUUCAGGAUACCUUCGGGACCCGUCUUGAAACACGGACCAAGGAGUCUAACAUAUGUGCAAGUUAUUGGGAUAUAAACCUAAUAGCGUAAUUAACUUGACUAAUAAUGGGAUUAGUUUUUUAGCUAUUUAUAGCUAAUUAACACAAUCCCGGGGCGUUCUAUAUAGUUAUGUAUAAUUAUGCCUCUAACUGGAACGUACCUUGAGCAUAUAUGCUGUGACCCGAAAGAUGGUGAACUAUACUUGAUCAGGUUGAAGUCAGGGGAAACCCUGAUGGAAGACCGAAACAGUUCUGACGUGCAAAUCGAUUGUCAGAAUUGAGUAUAGGGGCGAAAGACCAAUCGAACCAUCUAGUAGCUGGUUCCUUCCGAAGUUUCCCUCAGGAUAGCUGGUGCAUUUUAAUAAAUAAUCUUAUCUGGUAAAGCGAAUGAUUAGAGGCCUUAGGGUCGAAACGAUCUUAACCUAUUCUCAAACUUUAAAUGGGUAAGAACCUUAACUUUCUUGAUAUGAAGAUCAAGGUUAUGAUAUAAAUGUCCCAGUGGGCCACUUUUGGUAAGCAGAACUGGCGCUGUGGGAUGAACCAAACGUAAUGUUACGUGCCCAAAUUAACAACUCAUGCAGAUACCAUGAAAGGCGUUGGUUGCUUAAAACAGCAGGACGGUGAUCAUGGAAGUCGAAAUCCGCUAAGGAGUGUGUAACAACUCACCUGCCGAAGCAACUAGCCCUUAAAAUGGAUGGCGCUUAAGUUGUAUACCUAUACAUUACCGCUAAAGUAGAUGAUUUAUAUUACUUGUGAUAUAAAUUUUGAAACUUUAGUGAGUAGGAAGGUACAAUGGUAUGCGUAGAAGUGUUUGGCGUAAGCCUGCAUGGAGCUGCCAUUGGUACAGAUCUUGGUGGAUAGUAGCAAAUAAUCGAAUGAGAGCCUUGGAGGACUGAAGUGGAGAAGGGUUUCGUGUGAACAGUGGUUGAUCACGAGUUAGUCGGUCCUAAGUUCAAGGCGAAAGCGAAAAUUUUCAAGUAAAACAAAAAUGCCUAACUAUAUAAACAAAGCGAAUUAUAAUACACUUGAAuAAUUUUGAACGAAAGGGAAUACGGUUCCAAUUCCGUAACCUGUUGAGUAUCCGUUUGUUAUUAAAUAUGGGCCUCGUGCUCAUCCUGGCAACAGGAACGACCAUAAAGAAGCCGUCGAGAGAUAUCGGAAGAGUUUUCUUUUCUGUUUUAUAGCCGUACUACCAUGGAAGUCUUUCGCAGAGAGAUAUGGUAGAUGGGCUAGAAGAGCAUGACAUAUACUGUUGUGUCGAUAUUUUCUCCUCGGACCUUGAAAAUUUAUGGUGGGGACACGCAAACUUCUCAACAGGCCGUACCAAUAUCCGCAGCUGGUCUCCAAGGUGAAGAGUCUCUAGUCGAUAGAAUAAUGUAGGUAAGGGAAGUCGGCAAAUUAGAUCCGUAACUUCGGGAUAAGGAUUGGCUCUGAAGAUUGAGAUAGUCGAACAUGGUUUAUGUGCUCGUUCUGGGUAAAUAGAGUUUCUAGCAUUUAUGUUAGUUACUUGUUCCCCGGAUAGUUUAGUUACGUAGCCAGAAUACUAUUUGGGUUAAACCAAUUAGUUCCGAUUAUCAAUUAACAAUCAAUUCAGAACUGGCACGGACUUGGGGAAUCCGACUGUCUAAUUAAAACAAAGCAUUGUGAUGGCCCUAGCGGGUGUUGACACAAUGUGAUUUCUGCCCAGUGCUCUGAAUGUCAAAGUGAAGAAAUUCAAGUAAGCGCGGGUCAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGAUUAACGAGAUUCCUACUGUCCCUAUCUACUAUCUAGCGAAACCACAGCCAAGGGAACGGGCUUGGAAUAAUUAGCGGGGAAAGAAGACCCUUUUGAGCUUGACUCUAAUCUGGCAGUGUAAGGAGACAUAAGAGGUGUAGAAUAAGUGGGAGAUAUUAGACCUCGGUUUGGUAUCGUCAAUGAAAUACCACUACUCUUAUUGUUUCCUUACUUACUUGAUUAAAUGGAACGUGUAUCAUGAUGCAAGCUUCUUGAUCAAAGUAUCACGAGUACUCAGGUAUGAUCCAAUUCAAGGACAUUGCCAGGUAGGGAGUUUGACUGGGGCGGUACAUCUCUCAAAUAAUAACGGAGGUGUCCCAAGGCCAGCUCAGUGCGGACAGAAACCACACAUAGAGCAAAAGGGCAAAUGCUGACUUGAUCUCGGUGUUCAGUACACACAGGGACAGCAAAAGCUCGGCCUAUCGAUCCUUUUGGUUUAAAGAGUUUUUAACAAGAGGUGUCAGAAAAGUUACCAUAGGGAUAACUGGCUUGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUUUGAUCCUUCGAUGUCGGCUCUUCCUAUCAUUGUGAAGCAAAAUUCACCAAGCGUUGGAUUGUUCACCCAUGCAAGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUAAUGACAAAACGUUGUUGCGACAGCAUUCCUGCGUAGUACGAGAGGAACCCGCAGGUACGGACCAAUGGCACAAUACUUGUUCGAGCGAACAGUGGUAUGACGCUACGUCCGUUGGAUUAUGCCUGAACGCCUCUAAGGUCGUAUCCGUGCUGGACUGCAAUGAUAAAUAAGGGGCAAUUUGCAUUGUAUGGCUUCUAAACCAUUUAAAGUUUAUAAUUUACUUUAUAAACGACAAUGGAUGUGAUGCCAAUGUAAUUUGUAACAUAGUAAAUUGGGAGGAUCUUCGAUCACCUGAUGCCGCGCUAGUUACAUAUAAAAGCAUUAUUUAAUACAAUGACAAAGCCUAGAAUCAAUUGUAAACGACUUUUGUAACAGGCAAGGUGUUGUAAGUGGUUGAGCAGCUGCCAUACUGCGAUCCACUGAAGCUUAUCCUUUGCUUGAUGAUUCGA
......[[[.[[[[[[[.[[[[[[.(....(((((......(...[..).......)))).).........((....))...((((......((.]...)).....))))...((((........(((((((((((.....)))))).))))....)........(.(.((.......((((((......(((((((.(....({.(((.......))).)......[[(...).(((....}]])))....).)))))))...)))))).....)).).)...)....(((((((........))))))).....(((((..[[[[[[)))))..))).........(((((((.((...............((....))....((.........((((....)))).............(.....((((((((((......(((((.(..(((((........(((((((((.....(((((...((((((((((.....))))))))))...)))))......))))))))).......((((...(((((((.(((.((.(((.....(.(((...(((....((.(((.(..).))).).)......)))..))).).....))).)).).)).)))))))..........((((((((...(((((....))))).(((((((((((((..(((...)))..))))).)))))))).))))).))).......)))).........)))))....).))))).[.(((........))).((((((.....((.(((((((((..(((...(((.......)))...)))...(......).........((((((..(((..(((((((....)))))))..)))...))))))(((.((((....((((((.(((((())))))...)))))))))).).))....))))))))).))...((.(...((((((.....(((((((((..(((....(((((((....))))))).....)))...((...((.((.......<))))..))....))))))))).(.((.......))...)..))))))......).))..((((((....(.(((....))).)((.((((..(..........(.(.(((((((....(.....(((..(.(((...(((((((.....))))))).))).)..)))...).....)))))))...(.(.(.(((..(......)))).).).).....).)..)..))))...))..((((.(((((.....))))).))))....(((......)))...(((((((...(([[[...(.(.(((((.......(..........(((.((((((((((.......(.(((.(.(...((.........))...).).....(...((......)).).))).)...)))))))))))))..........]]].)....)))))))))....)))))))(((((((((....((((((((((((..)))))))))))).....)))))))))....))))))(.((((((((.((......((((..(((....))).))))...))))))))))..).....))))))((......((......((..............))..(((.....((((..((...(((((....((.....))..)))))....[[(((.((...(((....((....))...........(.(.(....---------------------------------------------)).)....)))....))...(((((........)))))]]((((((((......((.(....)))...................((((....)))...(....(.((......((..(((((((.(.((.((((...{{..)))).)(...(((((...(((((((.....(((.....))).....)))))))...))))).....)(((((((.....)))))))).)..))).))))..))............)).)....)).............)))))))).)))..)).....((......)).)))).((((.....))))..)))...((((.....(((((((.((..(............(((((....(.[..).....)))))((.(((((((((((.((((((((-----------------------------------------------------------------------------------------------------------------------))))))))......)))))..)))))).))(...).......(((((((((...((.........))...(((((((....((((....))))......))))))).].(((.(((...(((((.(...((.....((((....)))).....)).)))))..).)))(((((.........)))))........((..........(((((.......)))))..)..)....)))....)).)))))))....))).)))))))..))))))....))....(((((.....]..)))))....(((((..(((.((.......((..((((((..(((((.(((((((((...(((.(((((((((((............((....(((((((((....)))))))))..............))...))))))).)))).)))......((((.....((((....(((((())))))................((((...(((())))..))))..))))..)))).....)))))))))..)))))..(((.......)).)((((((...........))))))([((...((..(((.(.(((.(.........).)))...).((][.[[[))....)))..))....(((.(((.....{...))).)))..((......)).))]]].].....(((((...((((.]]]]]])))).)))))....)}....))))..)).))........((.(.(.((((((...((.......))...))))))...)).).).......(((((.((((((..(.(.(((((......)))))...).).(((.(.....).))).....))))).)...))).))....(((((((....))).))))..>.))..))).)))))........((((((((..((((.(.(((((......(....)......))))).)(((((...((((...((((((((((}}..)))))..)))))...)))).))))).((((....(((.............)))....)))).))))....)))))))).......(.....(((.((((((........(..............((((((......))))))..........)..................((((((.(((...((((((.((........)).))))))......)))))))))...................))))))...)))..)..((((....(.......)........(.(((((((..(.....((((....(.((........)).)...))))....).....)))).))).)..))))...
>strand_9
uGCUUGGACUACAUAUGGUUGAGGGUUGUA
.{{..{{{{{.]]]]]]]]]]]].].]]].
>strand_7
gCCAACGACCAUACCACGCUGAAUACAUCGGUUCUCGUCCGAUCACCGAAAUUAAGCAGCGUCGCGGGCGGUUAGUACUUAGAUGGGGGACCGCUUGGGAACACCGCGUGUUGUUGGCCU
(((((((((.....(((((((.....(.((((...(....)...))))...)....)))))).).(.(((((.....((.((..((....)).)).))....))))).))))))))))..
>strand_8
aACUCUAAGCGGUGGAUCACUCGGCUCAUGGGUCGAUGAAGAACGCAGCAAACUGUGCGUCAUCGUGUGAACUGCAGGACACAUGAACAUCGACAUUUUGAACGCAUAUCGCAGUCCAUGCUG
..)))))))))).....)))..)))))))))..)......((((((.[[.....))).....(.((((.....]]...........))))..)...)))....((.....))}}}}}..}}..