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Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
3J81
2, 1, 3
1
RIBOSOME
Electron Microscopy
4
2014-08-29
model 1
>strand_2
uAUCUGGUUGAUCCUGCCAGUAGUCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUAAGUAUAAGCAAUUUAUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUCGUUUAUUUGAUAGUUCCUUUACUACAUGGAUAUCUGUGGUAAUUCUAGAGCUAAUACAUGCUUAAAAUCUCGACCCUUUGGAAGAGAUGUAUUUAUUAGAUAAAAAAUCAAUGUCUUCGGACUCCUUGAUGAUUCAUAAUAACUUUUCGAAUCGCAUGGCCUUGUGCUGGCGAUGGUUCAUUCAAAUUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUUUCAACGGGUAACGGGGAAUAAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUACCCAAUCCUAAUUCAGGGAGGUAGUGACAAUAAAUAACGAUACAGGGCCCAUUCGGGUCUUGUAAUUGGAAUGAGUACAAUGUAAAUACCUUAACGAGGAACAACUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAGUAGCGUAUAUUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACUUUGGGUCUGGUUGUCCGGUCCGACUUUAUGUCGCGCACUGGUUUUUCAACCGGAUCUUUCCUUCUGGCUAACCUGUACUCCUUGUGGGUGCAGGCGAACCAGGACUUUUACUUUGAAAAAAUUAGAGUGUUCAAAGCAGGCGAAAGCUCGAAUAUAUUAGCAUGGAAUAAUGGAAUAGGACGUUUGGUUCUAUUUUGUUGGUUUCUAGGACCAUCGUAAUGAUUAAUAGGGACGGUCGGGGGCAUCAGUAUUCAAUUGUCAGAGGUGAAAUUCUUGGAUUUAUUGAAGACUAACUACUGCGAAAGCAUUUGCCAAGGACGUUUUCAUUAAUCAAGAACGAAAGUUAGGGGAUCGAAGAUGAUCAGAUACCGUCGUAGUCUUAACCAUAAACUAUGCCGACUAGGGAUCGGGUGGUGUUUUUCUUAUGACCCACUCGGCACCUUACGAGAAAUCAAAGUCUUUGGGUUCUGGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGGAAACUCACCAGGUCCAGACACAAUAAGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUUUGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUGAUUUGUCUGCUUAAUUGCGAUAACGAACGAGACCUUAACCUACUAAAUAGGGUUGCUGGCACUUGCCGGUUGACUCUUCUUAGAGGGACUAUCGGUUUCAAGCCGAUGGAAGUUUGAGGCAAUAACAGGUCUGUGAUGCCCUUAGACGUUCUGGGCCGCACGCGCGCUACACUGACGGAGCCAGCGAGUACAACCUUGGCCGAGAGGUCUGGGUAAUCUUGUGAAACUCCGUCGUGCUGGGGAUAGAGCAUUGUAAUUAUUGCUCUUCAACGAGGAAUUCCUAGUAAGCGCAAGUCAUCAGCUUGCGUUGAUUACGUCCCUGCCCUUUGUACACACCGCCCGUCGCUAGUACCGAUUGAAUGGCUUAGUGAGGCCUCAGGAUUUGCUUAGAGAUCUCAGAGCGAAGAAUCUGGUCAAACUUGGUCAUUUAGAGGAACUAAAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUA
...[.[[..(.(((..]].].(((.(((((....(.....((.....(((..((..((....((....((..........))...)){))........(.......(((..((...(....(((........................(.(.(......)).).................(((((..((....))..)))))(.(.((((((......[[.[[[[[((......)).....(......).)))))).)...).(.((....((((..).)))...)))...)))...).))..))).(((....(((....((((((((.......)))))))))))......)))...(((.((((....))))....))))...((.(.(..........).).)).(.((....)).)...)).))).).....(.(((...((.(.}...).).))))).)......)......(.........((....))..........).....................................(((...[....(.((((.....((..].)).......)))))..)))...))))))))...{......(((.....(.(.((...(((.(.....(..((((((((......(-------------------)......))))))))..)....((((((...............................))))))...(((((.((........(..((.......)).((.......))...).......)).))..)))........((....(......(....]]]]].]].)......)...)..)...)....(((.((..(...(((...((..((((((.(...(..........)......).))))))..)).......((....))....)))..)..))..)))...)))...)).)....(((((.........((((.........))))......)))))......[...(((.((.(((..(((.((((.(............))))).)))..)))...((....))...))...}.))))))).(((......((((....))))....)))...))).)(((((.((.((((..((..(((((..(((.(((.((......((........))..........(((((.(....((((....................................))))......(((...((((((((....(((.(.(((....)))..(.((......)))....).)))....(((((.((..((((...(((((.(((((....)))))..)))).)..)))).))..(.(((.((.....).))))....)..)))))....))).)))...).).))).......).)))))...))..))).))).(...((((((.......((.........((.(....).).).......))........))))))......(.....((((............)))).....)..)..))))).....((((((((.......))))))))......))...)))).))))).))..(.(..((.(...(((.((........((....((..((((..(...(..(.(..(....................)..).)..)...)..))))..))....)).......)).)))....).))...)..)..(((((((((....))))
>strand_1
AGCGCCGUGGCGCAGUGGAAGCGCGCAGGUCUCAUAAACCUGAUGUCCUCGGAUCGAAACCGAGCGGCGCUACCA
)))))]........-(..(((..((((.......))))..(((...[[[...)))........(((.......))
>strand_3
GGAAUCUCUCUCUAUGCUCUCUCUC
)..)))..).....---........
