You are 4275278 visitor.
Currently 13 users online.


Sequence & secondary structure in dot-bracket notation
       
 PDB id   NDB id  Strands     Number of models     Functional class     Experimental method     Resolution [Å]     PDB deposition
3ZEQ A, B1RIBOSOMEElectron Microscopy5.572012-12-07


model 1
>strand_A
gAUCUGGUUGAUUCUGCCAGUAGUCAUAUGCUUGUUUCAAGGACUUAGCCAUGCAUGCCUCAGAAUCACUGCAUUGCAGGAAUCUGCGCAUGGCUCAUUACAUCAGACGUAAUCUGCCGCCAAAAUUUUGCGGUCUCCGCAUUACUGGAUAACUUGGCGAAACGCCAAGCUAAUACAUGAACCAAUCGGACGCUCUCUUUUUCUAUGUCGCGGCUUGUGUUUACGCACUUGUCGUGGCGAUGAGACGUCCAGCGAAUGAAUGAAAUUAGAACCAACGCCUCCACCCGGGGGCAGUAACACUCAGACGUGUUGACUCAAUUCAUUCCGUGCGAAAGCCGAGCCUUUUUGCUCGGCGUCUACUGACGAACAACUGCCCUAUCAGCCAGUGAUGGCCGUGUAGUGGACUGCCAUGGCGUUGACGGGAGCGGGGGAUUAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAAUAGCUACCACUUCUACGGAGGGCAGCAGGCGCGCAAAUUGCCCAAUGUCGAAAAAAUACGAUGAGGCAGCGAAAAGAAAUAGAGCCGACCGUGCCCUAGUGCAUGGUUGUUUUCAAUGGGGGAUACUCAAACCCAUCCAAUAUCGAGUAACAAUUGGAGGACAAGUCUGGUGCCAGCACCCGCGGUAAUUCCAGCUCCAAAAGCGUAUAUUAAUGCUGUUGCUGUUAAAGGGUUCGUAGUUGAACUGUGGGCCACGUAGUUUUGUGCCGUGCCAGUCCCGUCCACCUCGGACGUGUUUUGACCCACGCCCUCGUGGCCCGUGAACACACUCAGAUACAAGAAACACGGGAGCGGUUCCUCCUCACUUUCACGCAUGUCAUGCAUGCGAGGGGGCGUCCGUGAAUUUUACUGUGACCAAAAAAGUGCGACCAAAGCAGUCUGCCGACUUGAAUUACAAAGCAUGGGAUAACGAAGCAUCAGCCCUGGGGCcACCGUUUCGGCUUUUGUUGGUUUUAGAAGUCCUUGGGAGAUUAUGGGGCCGCGUGCCUUGGGUCGGUGUUUCGUGUCUCAUUUUUGUGGCGCGCACAUUCGGCUCUUCGUGAUGUUUUUUUACAUUCAUUGCGACGCGCGGCUUCCAGGAAUGAAGGAGGGUAGUUCGGGGGAGAACGUACUGGUGCGUCAGAGGUGAAAUUCUUAGACCGCACCAAGACGAACUACAGCGAAGGCAUUCUUCAAGGAUACCUUCCUCAAUCAAGAACCAAAGUGUGGGGAUCAAAGAUGAUUAGAGACCAUUGUAGUCCACACUGCAAACCAUGACACCCAUGAAUUGGGGAACAUCAUUGGGUGCCCGUGUGGCGGCCUUUUGUGCCGACCCUCGGCCCCAAUUUAUUUAUCAAUUUACGUGCCUAUUCUAUCACCCCCGGUUCCCUCUUUUGAGGUUCUUCCGGGGUUUUUUACGGGAAUAUCCUCAGCACGUUUCUUACUUCUUCACGCGAAAGCUUGGAGGUUACAGUCUCAGGGGGGAGUACGUUCGCAAGAGUGAAACUUAAAGAAAUUGACGGAAUGGCACCACAAGACGUGGAGCGUGCGGUUUAAUUUGACUCAACACGGGGAACUUUACCAGAUCCGGACAGGGUGAGGAUUGACAGAUGGAGUGUUCUUUCUCGAUCCCCUGAAUGGUGGUGCAUGGCCGCUUUUGGUCGGUGGAGUGAUUUGUUUGGUUGAUUCCGUCAACGGACGAGAUCCAAGCUGCCCAGUAGGUGCCGGGAUUGUCCACACAGGACAGCAGUCCCUCCGGCGGGGAUUUUUUCCCCAACGGUGGUCGUCAUCCUUCUUUUUACAGGCCCCUUCUCUGCGGGAUUCCUUGCUUUUCGCGCAAGGUGAGAUUUUGGGCAACAGCAGGUCUGUGAUGCUCCUCAAUGUUCUGGGCGACACGCGCACUACAAUGUCAGUGAGAACAAGAGUCCGAGCGGCACUUCACAAUGUCGCUCCCGCUUGAUCAAAAGAGCGGGGAAACCACGGAAUCACGUAGACCCACUUGGGACCGAGUAUUGCAAUUAUUGGUCGCGCAACGAGGAAUGUCUCGUAGGCGCAGCUCAUCAAACUGUGCCGAUUACGUCCCUGCCAUUUGUACACACCGCCCGUCGUUGUUUCCGAUGAUGGUGCAAUACAGGUGAUCGGACCGUCGCUCGUCUCGGGCGACCGAAAGUUCACCGAUAUUGCUUCAAUAGAGGAAGCAAAAGUCGUAACAAGGUAGCUGUAGGUGAACCUGCAGCUGGAUCAUUU
...[[.[..(.((((.].]](.((.((((((...(((...(......(((.(((..(.....(.....((.......))....)..)......(((.......(((......((....(..(......(((((...)))))....((......(((((.....))))).......))..........(((((.((................(((................)))..........)))))))...(((((((.........[[[[...((((.(....).))))................(......)..))))))).........(((((((......)))))))...)..)...))....))).(((....((.....(((((.((.......)).))))).))......)))..(((.((((....))))....)))))).(..(((..........)))..).((((....))))...)))))).........(((...((((..........))).))))..)....))).....((.(((((((((......)))))))))..))........................................((((([[....(..(((.....((..]])).......))).))))))..)))))))).).........((({{...(.((((...(((..(....(((((((.......................((((.......))))...................)))))))....................(((.(((((.....(((((..............(((((...)))))....)))))..)))))..)))...((((.(.......(..............(......)......)......)))))................----------.....((..((((.(....]]]]...).))))...))........((((((((((.(...(.....(((((.................)))))...).....)....(((((((..............))))))).)))))).))))............(((..(.((...(((........((((..(...((........))......)..))))............((....))....)))..)).)...))).).)))...)))).....(((.(....(...((((.........))))...).).)))...........(...((...(....((.((((...((((((.(((.(.(.((((((.......)))).))).))))))))))...((....)).....((((.((((((.....((((((...((((....)))).....)))))).........))))))......)))))))).))...)......((..}})).....)).......))))).(((......((((....))))....)))..)))).)(((((.(.(((((..((..(.(((..((.((((((.......((........))..........(((((.(....(((((.....(..((.((..........)).))....).)))))...((.(((...((((((((.....((.(((((....)))....((......))....)).)).....((((..(..........(.(..(((...--------------.....((..(((..(((((.....)))))..))).)).......)))..............).)........)..(.((((((.......))))))....)...))))....))).)))...).).))))).....).)))))....).))))).)).(...(((.((...............(((((((.(....).)))))))....((((.((....)).))))................)).)))...........((..((..........))..))........)..))).).....(((((((.........)))))))......))...))))).)))).))..(.(..((.(.(((((........(((.((((((..((.(..(...(..(((((((...)))))))..)...)..).))..)))))).)))........)))))..).))...)..)..(((((((((....))))))))).........
>strand_B
gCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCA
(...........................((((.....))))........(((.........))).......).