RNA FRABASE - RNA FRAgments search engine & dataBASE

Sequence & secondary structure in dot-bracket notation

PDB id	NDB id	Strands	Number of models	Functional class	Experimental method	Resolution [Å]	PDB deposition
4D5L		1	1	RIBOSOME	Electron Microscopy	9	2014-11-05

model 1

>strand_1
uACCUGGUUGAUCCUGCCAGUAGCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUAAGUACGCACGGCCGGUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUGGUUCCUUUGGUCGCUCGCUCCUCUCCCACUUGGAUAACUGUGGUAAUUCUAGAGCUAAUACAUGCCGACGGGCGCUGACCCCCUUCGCGGGGGGGAUGCGUGCAUUUAUCAGAUCAAAACCAACCCGGUCAGCCCCUCUCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCUUUGGUGACUCUAGAUAACCUCGGGCCGAUCGCACGCCCCCCGUGGCGGCGACGACCCAUUCGAACGUCUGCCCUAUCAACUUUCGAUGGUAGUCGCCGUGCCUACCAUGGUGACCACGGGUGACGGGGAAUCAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUACCCACUCCCGACCCGGGGAGGUAGUGACGAAAAAUAACAAUACAGGACUCUUUCGAGGCCCUGUAAUUGGAAUGAGUCCACUUUAAAUCCUUUAACGAGGAUCCAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUAUAUUAAAGUUGCUGCAGUUAAAAAGCUCGUAGUUGGAUCUUGGGAGCGGGCGGGCGGUCCGCCGCGAGGCGAGCCACCGCCCGUCCCCGCCCCUUGCCUCUCGGCGCCCCCUCGAUGCUCUUAGCUGAGUGUCCCGCGGGGCCCGAAGCGUUUACUUUGAAAAAAUUAGAGUGUUCAAAGCAGGCCCGAGCCGCCUGGAUACCGCAGCUAGGAAUAAUGGAAUAGGACCGCGGUUCUAUUUUGUUGGUUUUCGGAACUGAGGCCAUGAUUAAGAGGGACGGCCGGGGGCAUUCGUAUUGCGCCGCUAGAGGUGAAAUUCUUGGACCGGCGCAAGACGGACCAGAGCGAAAGCAUUUGCCAAGAAUGUUUUCAUUAAUCAAGAACGAAAGUCGGAGGUUCGAAGACGAUCAGAUACCGUCGUAGUUCCGACCAUAAACGAUGCCGACCGGCGAUGCGGCGGCGUUAUUCCCAUGACCCGCCGGGCAGCUUCCGGGAAACCAAAGUCUUUGGGUUCCGGGGGGAGUAUGGUUGCAAAGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGAAACCUCACCCGGCCCGGACACGGACAGGAUUGACAGAUUGAUAGCUCUUUCUCGAUUCCGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGCGAUUUGUCUGGUUAAUUCCGAUAACGAACGAGACUCUGGCAUGCUAACUAGUUACGCGACCCCCGAGCGGUCGGCGUCCCCCAACUUCUUAGAGGGACAAGUGGCGUUCAGCCACCCGAGAUUGAGCAAUAACAGGUCUGUGAUGCCCUUAGAUGUCCGGGGCUGCACGCGCGCUACACUGACUGGCUCAGCGUGUGCCUACCCUACGCCGGCAGGCGCGGGUAACCCGUUGAACCCCAUUCGUGAUGGGGAUCGGGGAUUGCAAUUAUUCCCCAUGAACGAGGAAUUCCCAGUAAGUGCGGGUCAUAAGCUUGCGUUGAUUAAGUCCCUGCCCUUUGUACACACCGCCCGUCGCUACUACCGAUUGGAUGGUUUAGUGAGGCCCUCGGAUCGGCCCCGCCGGGGUCGGCCCACGGCCUCGGCGGAGCGCUGAGAAGACGGUCGAACUUGACUAUCUAGAGGAAGUAAAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUA
...[.[[..(.(((..]].].((.(((.((...(.....((.....(((.(((..(.....((.....................))..)......(((.......(.(...(..((....(((......................(....(..(((.....)))..)......)...........((....(...(......)...)....))......................{....-------------------------------------------------------....................((...((......))..))......)))...)))...).).(((....(((....((((.((.........)).)))))))......)))....((.(.((....)).)....)).))).((.(((..........))).)).(.((....)).)...)))))).).....(.(((...((.(.....).).))))).)......)......(..(((((...(....)....)))))...).......(...................).........((((.[.......(.((.....((...])).......)).)..))))..)).))).))...[......(.([[.....(.((....((.(.......(.(.(---------------------------------------).))..........((..(.---------------------------------.).))..........(..(........(...(.......)..(((.......)))....).......)..).................(.(.((.........}...........)).).)........)...((((.((..(...((((..(...(.((((.....((........))........)))).)...).......((....))...))))..)..))..)))..)))....)).)....((((((....(...(..(.........)..)...).))))))......{...(((.(...(...(.((((.(.(............)).)))).)...)....((..]]))....)...].))).).).(((......((((....))))....)))...))).)(.(((.(....(....(..(((((..(((.((((((.......(........)...........(((((.(....((((.........(...((........))...).......))))...((.(((...((((((((....(.(.(((........)....((......))....)).).).....((...(...(((...((.(....(((...((......))..)))....).))...)))..).....((((.......))))........)).....))).)))...).).))))).....).)))))...)).)))).))).(...((..((.......((.......(((.(.((....)).).)))....).).......))..))............(((((..........)))))........)..))))).....((((((((.......))))))))......).....)....))))..)..(.(..((.(..(.((.((..(.(.(.((((...(..(.((..(.....(...((((((.(.(.........).).)))))).....).....)..)).)..)...)))).).))..)).)).)...).))...)..)..(((((((((....)))))))))}........