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Institute of Computing Science
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Poznan University of Technology
Institute of Bioorganic Chemistry
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Polish Academy of Sciences
Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
4GAQ
NA1977
A, V, X
1
RIBOSOME/ANTIBIOTIC
X-Ray Difraction
3.3
2012-07-25
model 1
>strand_A
AaAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGAAGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUUA
-.......((((..[.[[[..)))).(((...((((..(((((.(((......(.(((..(((...(.((..(.((..(..........)..).).)))..).)))......(((......(((((((..((...(((((((.(..(.......(((......)))........)..)......(......).....(..(.(..........).)..).)))))))..)).)))))))(((....(((..(((.((((.......)))).))))))......)))..((((((((....))))...))))))).(((((............))))).((((....))))...))))...).......(((....((((....))))..)))..))..)))))..(..(......(((......))).....)..)...(.(.(.....(...(..(((.((.......)).)))...)...)......).)....)..((((([[[...(.(.(.....((.]]])).......).).))))))..))))..)))..........(((.[...(.((((...(((.(((((((.(..(((((((........((.(.....).))......)))))))....))))))))..(((((.(((...(((((((....((((((((...((........))......))))))))...........((....)).)))))))..)))..))))..))))...))))....((((((...((...(.(...........).)...))))))))......{...((((((..(((((((((((.......)))))))))))...((..].)).....)))))))))).(((.......(((....))).....)))...]]].](((((.(((((((.((..((..(..(((((.((((......((........))...........((.(....(...(..(..(.......(......).........(....)...)..)...)).((.(((....((((..(....(.(((((((....)))...((........))...)))).).....((((.(((((......(....(......).).......)))))..(...(..(.....)..)......)..)))).....)...)))...)..)))))......).))....)).)).))))).(...(((((.(.....(((..((...(........)...))....))).....).)))))......(....((.((.(........).)).))....)..)..)..)).....(((((((.........)))))))......))...)))))))))).))..(.(..((.(...((.(((..(((((.((..((....(..(((.((((..((....)).)))))))..)...))..)).)))))..))).))....).))...)..)..(((((((((....)))))))))}.....((((((--
>strand_V
GCCCGGAUAGCUCAGUCGGUAGAGCAGGGGAUUGAAAAUCCCCGUGUCCUUGGUUCGAUUCCGAGUCCGGGCACCA
(((.(((..((((........)))).(((((..[[[..))))).....(((.(.......).)))))).)))....
>strand_X
GGCAAGGAGGUAAAAUUCUACAAA
---.)))))).....]]].-----
