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Sequence & secondary structure in dot-bracket notation
PDB id
NDB id
Strands
Number of models
Functional class
Experimental method
Resolution [Å]
PDB deposition
5AJ3
A, V, X, Y
1
RIBOSOME
Electron Microscopy
3.6
2015-02-20
model 1
>strand_A
ACaCAGGUUUGGUCCUGGCCUUUCUAUUAAUUCUUAAUAAAAUUACACAUGCAAGUAUCCGCGCCCCGGUGAGAAUGCCCUCCAGAUCUUAAAGAUCAAAAGGAGCAGGUAUCAAGCACACCUAUAACGGUAGCUCAUAACGCCUUGCUCAACCACACCCCCACGGGAAACAGCAGUGAUAAAAAUUAAGCCAUGAACGAAAGUUUGACUAAGUUAUAUUAAUUAGAGUUGGUAAAUCUCGUGCCAGCCACCGCGGUCAUACGAUUAACCCAAAUUAAUAGAUCCACGGCGUAAAGAGUGUUUAAGAAAAAAAAUCACAAUAGAGUUAAAUUAUAACUAAGCUGUAAAAAGCCCUAGUUAAAAUAAAAUAACCCACGAAAGUGACUCUAAUAAUCCUGACACACGAUAGCUAGGACCCAAACUGGGAUUAGAUACCCCACUAUGCCUAGCCCUAAACCCAAAUAGUUACAUAACAAAACUAUUCGCCAGAGUACUACUCGCAACUGCCUAAAACUCAAAGGACUUGGCGGUGCUUCACAUCCACCUAGAGGAGCCUGUUCUAUAAUCGAUAAACCCCGAUAGACCUUACCAACCCUUGCCAAUUCAGCCUAUAUACCGCCAUCUUCAGCAAACCCUAAAAAGGAACAAUAGUAAGCACAAUCAUAGCACAUAAAAACGUUAGGUCAAGGUGUAGCUUAUGGGUUGGAAAGAAAUGGGCUACAUUUUCUACAUAAGAAUAUCCACCACACGAAAGUUUUUAUGAAACUAAAAACCAAAGGAGGAUUUAGCAGUAAAUCAAGAAUAGAGUGCUUGAUUGAAUAAGGCCAUGAAGCACGCACACACCGCCCGUCACCCUCCUCAAGCAUGUAGUAAUAAAAAUAACCUAUAUUCAAUUACACAACCAUGCAAGAAGAGACAAGUCGUAACAAGGUAAGCAUACUGGAAAGUGUGCUUGGAUUACC
--[.[[[[..(((((..]]]]](((((((((..((((((((....(((.(((..((....))......(((.....(((((...(((((...)))))...))).)).(((....((..((((......))).)))......)))..(.....)))).(((....))).....)))))).......(..((...(((((....)))).))).).)).))))))...(.((([[[.....(((.....((.]]])).......)))..))).)..))))))))).....((([......((((...((..............(((((((......((((((.((........))..))))))......).....(.((....)))))))))......))...))))....((((((...((...((((.........))))...))))))))......{...(((((((......]..))))))).))).(((........((....))......)))...)))))(((((.(((((.(...((..(((((..((((((((((.....((........))..........(((((((..(......).((.(((...((((((.(....((..(((((....))).......))..))......((.....))......).).)))...)).)))))....)))))))..)).)))))))).(...((((.....))))..(.....)..(....(((((((......)))))))....)..)..))))).....(((((((.........)))))))......))...).)))))))).))..(.(..((.(...(((.((..((((((.(((((...((((.....))))..)))))...).)))))..)).)))....).))...)..)..(((((((((....)))))))))}.......
>strand_V
uuuuuuuuuuuuuuuuuuuuuuuuuuuuaaauuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuu
----.-----------------------------------------------------------
>strand_X
uuuuuuuuuuuuu
-------------
>strand_Y
uuuuuuuuuuuuuuuuuuuuuuuuuuuuaaauuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuuu
----------------------------------------------------------------